References | Create an ecospace framework (functional trait space) | Use ecospace framework to simulate a 50-species assemblage using the 'neutral' rule | Compare with assemblages built using the 'redundancy', 'partitioning', and 'expansion' rules | Redundancy rules | Partitioning rules | Expansion rules | Visually comparing four rules | Calculate ecological disparity (functional diversity) metrics
Package: ecospace 1.4.2
ecospace: Simulating Community Assembly and Ecological Diversification Using Ecospace Frameworks
Implements stochastic simulations of community assembly (ecological diversification) using customizable ecospace frameworks (functional trait spaces). Provides a wrapper to calculate common ecological disparity and functional ecology statistical dynamics as a function of species richness. Functions are written so they will work in a parallel-computing environment.
Authors:
ecospace_1.4.2.tar.gz
ecospace_1.4.2.zip(r-4.7-any)ecospace_1.4.2.zip(r-4.6-any)ecospace_1.4.2.zip(r-4.5-any)
ecospace_1.4.2.tgz(r-4.6-any)ecospace_1.4.2.tgz(r-4.5-any)
ecospace_1.4.2.tar.gz(r-4.7-any)ecospace_1.4.2.tar.gz(r-4.6-any)
ecospace_1.4.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
ecospace/json (API)
| # Install 'ecospace' in R: |
| install.packages('ecospace', repos = c('https://pnovack-gottshall.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/pnovack-gottshall/ecospace/issues
Datasets:
- KWTraits - Species-by-Trait Matrix for Late Ordovician Marine Fossils.
Last updated from:3b1464498a. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 175 | ||
| source / vignettes | OK | 229 | ||
| linux-release-x86_64 | OK | 151 | ||
| macos-release-arm64 | OK | 86 | ||
| macos-oldrel-arm64 | OK | 79 | ||
| windows-devel | OK | 95 | ||
| windows-release | OK | 99 | ||
| windows-oldrel | OK | 93 | ||
| wasm-release | OK | 134 |
Exports:calc_metricscreate_ecospaceexpansionneutralpartitioningprep_datarbind_listdfredundancysample2unique2
Dependencies:abindade4apeclusterdigestFDgeometrylatticelinproglpSolvemagicMASSMatrixmgcvnlmepermutepixmapRcppRcppArmadilloRcppProgressspvegan
